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Thermo Fisher Scientific
Lead Data EngineerThermo Fisher Scientific • Manila, Philippines
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Lead Data Engineer

Lead Data Engineer

Thermo Fisher Scientific • Manila, Philippines
30+ days ago
Job description

:

  • Design, develop, deploy, and operate scalable ETL and data pipelines using PySpark, Python, advanced SQL, and AWS data services
  • Own data pipeline lifecycle from requirements, mapping, development, testing, deployment, monitoring, production support, release management, and future roadmap planning
  • Build ingestion and transformation pipelines for flat files, relational databases, APIs, data warehouses, healthcare data sources, and enterprise data platforms
  • Implement mapping automation, preferably using AI, along with LLM-assisted data cleaning, transformation, data quality checks, and RAG use cases
  • Implement secure handling of PHI/PII data including encryption, access controls, auditability, retention, masking, de-identification, governance, and operational readiness

Knowledge, Skills, and Abilities:

  • Advanced expertise in PySpark, Python, advanced SQL, ETL best practices, data modeling, and large-scale data processing
  • Strong hands-on experience with AWS services including S3, Glue, Lambda, Step Functions, ECS, DynamoDB, Redshift, RDS/PostgreSQL, and related data services
  • Experience with PostgreSQL, SQL Server, Redshift, flat files, complex source-to-target mappings, HL7, claims data, EMR extracts, and clinical trial data
  • Knowledge of data cataloging, metadata management, transformation standards, orchestration, monitoring, data quality, CI/CD, automated testing, and production support practices
  • Ability to lead technical design, mentor engineers, guide delivery decisions, troubleshoot complex issues, and communicate with cross-functional teams

Must Have Skills:

  • Advanced PySpark, Python, advanced SQL, ETL design, and data pipeline engineering expertise
  • AWS data services experience including S3, Glue, Lambda, Step Functions, ECS, DynamoDB, Redshift, PostgreSQL, and SQL Server integration
  • Secure PHI/PII handling, flat-file ingestion, source-to-target mapping, transformation, data catalog, governance, and healthcare data standards experience
  • CI/CD, GitHub workflows, automated testing, release management for data pipelines and database changes, and dev-to-prod pipeline ownership

Good to Have Skills:

  • AI-assisted mapping automation and use of LLMs for data cleaning, data quality checks, transformation logic, documentation, and patient de-identification support
  • Experience with RAG patterns, embeddings, vector databases, semantic search, or AI-enabled data discovery solutions
  • Familiarity with infrastructure as code such as Terraform or CloudFormation, plus streaming, Databricks, Snowflake, observability, and DevOps practices

Working Hours:

  • India: 05:30 PM to 02:30 AM IST
  • Philippines: 08:00 PM to 05:00 AM PHT
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Lead Data Engineer • Manila, Philippines